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私はdcm4cheeからデータを取得するためにpynetdicomスクリプトを使用しています。 スクリプトを実行するにはコマンドラインから引数を渡す必要があります。 しかし、私はすでにいくつかの変数や他のオブジェクトでその値を持っているので、そこから使用する必要がありますが、その値をパーサに渡すことができないか、解析しないで行うことができますか？argparseのコマンドラインの代わりに変数から値を取得
私は、コマンドラインを通す代わりに、いくつかの変数を使って値を渡すことができますか教えてください。
スクリプト：
#!/usr/bin/python
"""
For help on usage,
python qrscu.py -h
"""
import argparse
from netdicom.applicationentity import AE
from netdicom.SOPclass import *
from dicom.dataset import Dataset, FileDataset
from dicom.UID import ExplicitVRLittleEndian, ImplicitVRLittleEndian, ExplicitVRBigEndian
import netdicom
import tempfile
# parse commandline
parser = argparse.ArgumentParser(description='storage SCU example')
print "parser", parser
parser.add_argument('remotehost')
parser.add_argument('remoteport', type=int)
parser.add_argument('searchstring')
parser.add_argument('-p', help='local server port', type=int, default=9999)
parser.add_argument('-aet', help='calling AE title', default='PYNETDICOM')
parser.add_argument('-aec', help='called AE title', default='REMOTESCU')
parser.add_argument('-implicit', action='store_true', help='negociate implicit transfer syntax only', default=False)
parser.add_argument('-explicit', action='store_true', help='negociate explicit transfer syntax only', default=False)
args = parser.parse_args()
print "args :::: ", type(args), args
if args.implicit:
ts = [ImplicitVRLittleEndian]
elif args.explicit:
ts = [ExplicitVRLittleEndian]
else:
ts = [
ExplicitVRLittleEndian,
ImplicitVRLittleEndian,
ExplicitVRBigEndian
]
# call back
def OnAssociateResponse(association):
print "Association response received"
def OnAssociateRequest(association):
print "Association resquested"
return True
def OnReceiveStore(SOPClass, DS):
print "Received C-STORE", DS.PatientName
try:
# do something with dataset. For instance, store it.
file_meta = Dataset()
file_meta.MediaStorageSOPClassUID = '1.2.840.10008.5.1.4.1.1.2'
file_meta.MediaStorageSOPInstanceUID = "1.2.3" # !! Need valid UID here
file_meta.ImplementationClassUID = "1.2.3.4" # !!! Need valid UIDs here
filename = '%s/%s.dcm' % (tempfile.gettempdir(), DS.SOPInstanceUID)
ds = FileDataset(filename, {}, file_meta=file_meta, preamble="\0" * 128)
ds.update(DS)
ds.save_as(filename)
print "File %s written" % filename
except:
pass
# must return appropriate status
return SOPClass.Success
# create application entity with Find and Move SOP classes as SCU and
# Storage SOP class as SCP
MyAE = AE(args.aet, args.p, [PatientRootFindSOPClass,
PatientRootMoveSOPClass,
VerificationSOPClass], [StorageSOPClass], ts)
MyAE.OnAssociateResponse = OnAssociateResponse
MyAE.OnAssociateRequest = OnAssociateRequest
MyAE.OnReceiveStore = OnReceiveStore
MyAE.start()
# remote application entity
RemoteAE = dict(Address=args.remotehost, Port=args.remoteport, AET=args.aec)
# create association with remote AE
print "Request association"
assoc = MyAE.RequestAssociation(RemoteAE)
# perform a DICOM ECHO
print "DICOM Echo ... ",
if assoc:
st = assoc.VerificationSOPClass.SCU(1)
print 'done with status "%s"' % st
print "DICOM FindSCU ... ",
print "\n\n----------------------------------------------------------------------\n\n"
d = Dataset()
d.StudyDate = args.searchstring
d.QueryRetrieveLevel = "STUDY"
d.PatientID = "*"
study = [x[1] for x in assoc.PatientRootFindSOPClass.SCU(d, 1)][:-1]
print 'done with status "%s"' % st
print "\n\n\n Cont...", study
print "\n\n----------------------------------------------------------------------\n\n"
# loop on patients
for pp in study:
print "\n\n----------------------Pateint Detals------------------------------------------------\n\n"
print "%s - %s" % (pp.StudyDate, pp.PatientID)
# find studies
d = Dataset()
d.PatientID = pp.PatientID
d.QueryRetrieveLevel = "STUDY"
d.PatientName = ""
d.StudyInstanceUID = ""
d.StudyDate = ""
d.StudyTime = ""
d.StudyID = ""
d.ModalitiesInStudy = ""
d.StudyDescription = ""
studies = [x[1] for x in assoc.PatientRootFindSOPClass.SCU(d, 1)][:-1]
# loop on studies
for st in studies:
print "\n study :: ", studies
print "\n\n---------------------------Study---------------------------\n\n"
print " %s - %s %s" % (st.StudyDescription, st.StudyDate, st.StudyTime)
d = Dataset()
d.QueryRetrieveLevel = "SERIES"
d.StudyInstanceUID = st.StudyInstanceUID
d.SeriesInstanceUID = ""
d.InstanceNumber = ""
d.Modality = ""
d.SeriesNumber = ""
d.SeriesDescription = ""
d.AccessionNumber = ""
d.SeriesDate = ""
d.SeriesTime = ""
d.SeriesID = ""
d.NumberOfSeriesRelatedInstances = ""
series = [x[1] for x in assoc.PatientRootFindSOPClass.SCU(d, 1)][:-1]
# print series uid and number of instances
if series:
for se in series:
print "\n\n---------------------------Series---------------------------\n\n"
print "\n\n\n series", se
print " %15s - %10s - %35s - %5s" % (se.SeriesNumber, se.Modality, se.SeriesDescription, se.NumberOfSeriesRelatedInstances)
print "Release association"
assoc.Release(0)
# done
MyAE.Quit()
else:
print "Failed to create Association."
# vim:expandtab:smartindent:tabstop=4:softtabstop=4:shiftwidth=4:
_variable1_にいくつかのデータを持つ_program1.py_プログラムがあり、_variable1_をパラメータとして_qrscu.py_ programを使用しますか？ –
すべてを関数の中に入れます。 – Daniel